BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023H05SP1|AL428129
(1035 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1229 1884 0.0
>3x_Contig1229
Length = 4630
Score = 1884 bits (947), Expect = 0.0
Identities = 972/982 (98%), Gaps = 2/982 (0%)
Strand = Plus / Plus
Query: 54 tgaccagtgacccatttaatgatcacctgatatgtaaataccaaaaaactctatatatgg 113
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaccagtgacc-atttaatgatcacctgatatgtaaataccaaaaaactctatatatgg 59
Query: 114 caatggtataccaaccttctataccgtaacaacgccggcgtgcggccaagacataaacac 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 caatggtataccaaccttctataccgtaacaacgccggcgtgcggccaagacataaacac 119
Query: 174 gcgcagagaaaaacctctgcgcgtnagtgtatatyctcttatctgtacctcttggacata 233
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 120 gcgcagagaaaaacctctgcgcgtgagtgtatattctcttatctgtacctcttggacata 179
Query: 234 acgtgtcacaacttatataatacagagcagatacagggtacggtgccgcacagcacttcc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 acgtgtcacaacttatataatacagagcagatacagggtacggtgccgcacagcacttcc 239
Query: 294 agagcgcttgtctactcttccctcttccatcttccatctcgtctttccttcttgctactg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 agagcgcttgtctactcttccctcttccatcttccatctcgtctttccttcttgctactg 299
Query: 354 tgccttgccattcccctgtactaaattagctcggatcacattcacaaaatttcgttagtc 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgccttgccattcccctgtactaaattagctcggatcacattcacaaaatttcgttagtc 359
Query: 414 accctgcaatgtcgcacagtacctgcagtactaagctcgtttctctaccacaatttcctt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 accctgcaatgtcgcacagtacctgcagtactaagctcgtttctctaccacaatttcctt 419
Query: 474 agcttcttttttttggattttttcagtttaaactgccctgggaaagatgctggaaatcaa 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agcttcttttttttggattttttcagtttaaactgccctgggaaagatgctggaaatcaa 479
Query: 534 tttgcgatatataaaahagataaaatacatctatatatatatatatatagyvbgcatcat 593
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 480 tttgcgatatataaaatagataaaatacatctatatatatatatatatagtatgcatcat 539
Query: 594 attatgtattcaagtacatttattgaaactaggcctgttctcgtagaaatcagcttcaaa 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 attatgtattcaagtacatttattgaaactaggcctgttctcgtagaaatcagcttcaaa 599
Query: 654 ttatttcgttcgagtggactgaaaggttgaacgcaccctggttattagttgtttctcatt 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttatttcgttcgagtggactgaaaggttgaacgcaccctggttattagttgtttctcatt 659
Query: 714 aattaatcttcttttttttaagtgtgtgagtgtggaaaagtggtcatactaaaatcgtct 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aattaatcttcttttttttaagtgtgtgagtgtggaaaagtggtcatactaaaatcgtct 719
Query: 774 ttcggttattaattcacatttagtcgcatgttccttcagatacacgacaaataggagaat 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ttcggttattaattcacatttagtcgcatgttccttcagatacacgacaaataggagaat 779
Query: 834 aaaccgttttcaagttcagaagaaatcaaatatcatcagtcaacacattaactatgccat 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 aaaccgttttcaagttcagaagaaatcaaatatcatcagtcaacacattaactatgccat 839
Query: 894 ctttgttaggtttgtctttccataggaagaagactcattcttcgtcacagttgagtttgg 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ctttgttaggtttgtctttccataggaagaagactcattcttcgtcacagttgagtttgg 899
Query: 954 catccggagcgactgcggacaaagagcgaggacacggacgttcgtctccttcttccggat 1013
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 900 catccggagcgactgcgga-gaagagcgaggacacggacgttcgtctccttcttccggat 958
Query: 1014 caccaaakagtcatcatcacaa 1035
||||||| ||||||||||||||
Sbjct: 959 caccaaatagtcatcatcacaa 980
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,698
Number of Sequences: 1807
Number of extensions: 12698
Number of successful extensions: 1606
Number of sequences better than 1.0e-20: 1
length of query: 1035
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1019
effective length of database: 10,329,639
effective search space: 10525902141
effective search space used: 10525902141
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)